Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-his | Not Available | Not Available | Positive | 1587289 - 1587362 | Not Available |
| hypothetical protein | HMPREF1065_01402 | Not Available | Negative | 1587438 - 1588511 | 40961.7 |
| hypothetical protein | HMPREF1065_01403 | Not Available | Negative | 1588585 - 1588725 | 5180.07 |
| fold protein | HMPREF1065_01404 | Not Available | Negative | 1589449 - 1590330 | 31614.8 |
| signal recognition particle protein | HMPREF1065_01405 | Not Available | Negative | 1590449 - 1591771 | 48868.7 |
| mate efflux family protein | HMPREF1065_01406 | Not Available | Negative | 1591870 - 1593192 | 48804.5 |
| hypothetical protein | HMPREF1065_01407 | Not Available | Negative | 1593292 - 1593540 | 9652.1 |
| hypothetical protein | HMPREF1065_01408 | Not Available | Positive | 1593797 - 1595164 | 49228.4 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1065_01409 | Not Available | Negative | 1595224 - 1595784 | 21912.5 |
| hypothetical protein | HMPREF1065_01410 | Not Available | Negative | 1595809 - 1596900 | 40526.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

