Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_01392 | Not Available | Negative | 1566932 - 1569931 | 112058.0 |
| hypothetical protein | HMPREF1065_01393 | Not Available | Negative | 1570251 - 1574201 | 152084.0 |
| hypothetical protein | HMPREF1065_01394 | Not Available | Negative | 1574384 - 1575517 | 42569.4 |
| hypothetical protein | HMPREF1065_01395 | Not Available | Negative | 1575523 - 1577337 | 69228.3 |
| hypothetical protein | HMPREF1065_01396 | Not Available | Negative | 1577955 - 1579133 | 44813.2 |
| hypothetical protein | HMPREF1065_01397 | Not Available | Negative | 1579141 - 1580517 | 51200.3 |
| hypothetical protein | HMPREF1065_01398 | Not Available | Negative | 1580529 - 1581920 | 53222.6 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1065_01399 | Not Available | Negative | 1581939 - 1585433 | 130495.0 |
| hypothetical protein | HMPREF1065_01400 | Not Available | Negative | 1585491 - 1586570 | 41318.0 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1065_01401 | Not Available | Negative | 1586643 - 1587209 | 22678.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

