Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01372 | Not Available | Positive | 1545710 - 1546300 | 22264.4 |
| hypothetical protein | HMPREF1065_01373 | Not Available | Positive | 1546300 - 1546992 | 26630.0 |
| hypothetical protein | HMPREF1065_01374 | Not Available | Positive | 1547078 - 1547350 | 10701.8 |
| hypothetical protein | HMPREF1065_01375 | Not Available | Positive | 1547542 - 1548003 | 17820.7 |
| hypothetical protein | HMPREF1065_01376 | Not Available | Positive | 1547987 - 1549597 | 63016.0 |
| hypothetical protein | HMPREF1065_01377 | Not Available | Positive | 1549610 - 1550743 | 44099.1 |
| glucose-1-phosphate thymidylyltransferase | HMPREF1065_01378 | Not Available | Positive | 1550769 - 1551677 | 33538.4 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | HMPREF1065_01379 | Not Available | Positive | 1551765 - 1552322 | 21245.3 |
| dtdp-4-dehydrorhamnose reductase | HMPREF1065_01380 | Not Available | Positive | 1552414 - 1553328 | 33880.2 |
| dtdp-glucose 4,6-dehydratase | HMPREF1065_01381 | Not Available | Positive | 1553312 - 1554487 | 45246.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

