Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylenolpyruvoylglucosamine reductase | HMPREF1065_01332 | Not Available | Negative | 1504114 - 1505127 | 37541.0 |
| hypothetical protein | HMPREF1065_01333 | Not Available | Negative | 1505139 - 1505999 | 33490.7 |
| phenylalanyl-trna synthetase alpha chain | HMPREF1065_01334 | Not Available | Positive | 1506111 - 1507145 | 38966.7 |
| hypothetical protein | HMPREF1065_01335 | Not Available | Positive | 1507271 - 1508467 | 43901.7 |
| hypothetical protein | HMPREF1065_01336 | Not Available | Negative | 1508464 - 1509606 | 43043.3 |
| hypothetical protein | HMPREF1065_01337 | Not Available | Negative | 1509696 - 1510289 | 22676.3 |
| hypothetical protein | HMPREF1065_01338 | Not Available | Negative | 1510273 - 1511256 | 37387.9 |
| hypothetical protein | HMPREF1065_01339 | Not Available | Positive | 1511579 - 1512826 | 47807.1 |
| hypothetical protein | HMPREF1065_01340 | Not Available | Positive | 1512811 - 1513197 | 15033.2 |
| hypothetical protein | HMPREF1065_01341 | Not Available | Positive | 1513335 - 1513502 | 6202.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

