Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01303 | Not Available | Positive | 1471224 - 1472408 | 45032.7 |
| hypothetical protein | HMPREF1065_01304 | Not Available | Positive | 1472470 - 1474647 | 86178.6 |
| hypothetical protein | HMPREF1065_01305 | Not Available | Negative | 1474639 - 1475460 | 31744.8 |
| aspartate-alanine antiporter | HMPREF1065_01306 | Not Available | Positive | 1475587 - 1477287 | 61206.6 |
| aspartate 4-decarboxylase | HMPREF1065_01307 | Not Available | Positive | 1477308 - 1478948 | 62580.2 |
| hypothetical protein | HMPREF1065_01308 | Not Available | Positive | 1479097 - 1480494 | 52282.7 |
| hypothetical protein | HMPREF1065_01309 | Not Available | Positive | 1480652 - 1481140 | 17131.3 |
| hypothetical protein | HMPREF1065_01310 | Not Available | Positive | 1481263 - 1481901 | 24035.1 |
| hypothetical protein | HMPREF1065_01311 | Not Available | Positive | 1481943 - 1482569 | 23497.7 |
| hypothetical protein | HMPREF1065_01312 | Not Available | Positive | 1482722 - 1483471 | 28432.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

