Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01293 | Not Available | Positive | 1455985 - 1457862 | 71699.5 |
| v-type h(+)-translocating pyrophosphatase | HMPREF1065_01294 | Not Available | Positive | 1458129 - 1460333 | 77051.7 |
| hypothetical protein | HMPREF1065_01295 | Not Available | Negative | 1460458 - 1460874 | 15368.8 |
| hypothetical protein | HMPREF1065_01296 | Not Available | Negative | 1460888 - 1462189 | 48660.7 |
| hypothetical protein | HMPREF1065_01297 | Not Available | Negative | 1462284 - 1463588 | 48688.3 |
| indolepyruvate ferredoxin oxidoreductase, beta subunit | HMPREF1065_01298 | Not Available | Negative | 1463593 - 1464174 | 21305.8 |
| indolepyruvate ferredoxin oxidoreductase, alpha subunit | HMPREF1065_01299 | Not Available | Negative | 1464171 - 1465787 | 58781.5 |
| hypothetical protein | HMPREF1065_01300 | Not Available | Negative | 1465811 - 1466572 | 28435.7 |
| tonb family domain-containing protein | HMPREF1065_01301 | Not Available | Negative | 1466762 - 1467448 | 25688.9 |
| transcription-repair coupling factor | HMPREF1065_01302 | Not Available | Negative | 1467751 - 1471116 | 127181.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

