Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose mutarotase | HMPREF1065_01253 | Not Available | Positive | 1412506 - 1413660 | 41869.5 |
| solute:sodium symporter (sss) family transporter | HMPREF1065_01254 | Not Available | Positive | 1413687 - 1415429 | 64469.9 |
| hypothetical protein | HMPREF1065_01255 | Not Available | Positive | 1415505 - 1416182 | 26233.5 |
| l-ribulose-5-phosphate 4-epimerase | HMPREF1065_01256 | Not Available | Positive | 1416187 - 1416939 | 27600.2 |
| l-arabinose isomerase | HMPREF1065_01257 | Not Available | Positive | 1416979 - 1418508 | 57215.2 |
| hypothetical protein | HMPREF1065_01258 | Not Available | Positive | 1418611 - 1420209 | 57692.0 |
| hypothetical protein | HMPREF1065_01259 | Not Available | Positive | 1420344 - 1422356 | 72454.5 |
| ribose 5-phosphate isomerase b | HMPREF1065_01260 | Not Available | Positive | 1422353 - 1422787 | 15926.0 |
| hypothetical protein | HMPREF1065_01261 | Not Available | Positive | 1422894 - 1423991 | 40586.6 |
| hypothetical protein | HMPREF1065_01262 | Not Available | Negative | 1424083 - 1424244 | 5885.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

