Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine biosynthesis hisb | HMPREF1065_01213 | Not Available | Negative | 1368873 - 1369991 | 42328.9 |
| histidinol-phosphate aminotransferase | HMPREF1065_01214 | Not Available | Negative | 1369995 - 1371035 | 39609.4 |
| histidinol dehydrogenase | HMPREF1065_01215 | Not Available | Negative | 1371038 - 1372318 | 46543.3 |
| atp phosphoribosyltransferase | HMPREF1065_01216 | Not Available | Negative | 1372368 - 1373219 | 31321.3 |
| hypothetical protein | HMPREF1065_01217 | Not Available | Negative | 1373449 - 1373940 | 18778.8 |
| hypothetical protein | HMPREF1065_01218 | Not Available | Negative | 1373951 - 1374250 | 11114.5 |
| uridine kinase | HMPREF1065_01219 | Not Available | Positive | 1374357 - 1374968 | 23296.4 |
| hypothetical protein | HMPREF1065_01220 | Not Available | Positive | 1374965 - 1376344 | 51989.1 |
| hypothetical protein | HMPREF1065_01221 | Not Available | Negative | 1377480 - 1377647 | 6471.89 |
| hypothetical protein | HMPREF1065_01222 | Not Available | Negative | 1377714 - 1377890 | 6441.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

