Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01183 | Not Available | Negative | 1335475 - 1336341 | 30909.7 |
| hypothetical protein | HMPREF1065_01184 | Not Available | Positive | 1336438 - 1336611 | 6826.52 |
| hypothetical protein | HMPREF1065_01185 | Not Available | Negative | 1336553 - 1336717 | 6154.25 |
| capsular exopolysaccharide family protein | HMPREF1065_01186 | Not Available | Negative | 1336761 - 1339172 | 89842.8 |
| hypothetical protein | HMPREF1065_01187 | Not Available | Negative | 1339210 - 1340010 | 29370.8 |
| hypothetical protein | HMPREF1065_01188 | Not Available | Negative | 1340036 - 1340470 | 16581.7 |
| hypothetical protein | HMPREF1065_01189 | Not Available | Negative | 1340489 - 1341139 | 24635.1 |
| hypothetical protein | HMPREF1065_01190 | Not Available | Negative | 1341276 - 1342211 | 36359.0 |
| chaperone dnak | HMPREF1065_01191 | Not Available | Negative | 1342430 - 1344349 | 68477.3 |
| hypothetical protein | HMPREF1065_01192 | Not Available | Negative | 1344678 - 1345469 | 28702.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

