Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01143 | Not Available | Negative | 1294169 - 1294759 | 22935.3 |
| hypothetical protein | HMPREF1065_01144 | Not Available | Negative | 1294769 - 1296367 | 59634.0 |
| hypothetical protein | HMPREF1065_01145 | Not Available | Negative | 1296400 - 1296729 | 12279.9 |
| hypothetical protein | HMPREF1065_01146 | Not Available | Negative | 1296763 - 1299264 | 90628.5 |
| mate efflux family protein | HMPREF1065_01147 | Not Available | Positive | 1299501 - 1300856 | 49626.2 |
| hypothetical protein | HMPREF1065_01148 | Not Available | Negative | 1300819 - 1302681 | 67150.1 |
| hypothetical protein | HMPREF1065_01149 | Not Available | Positive | 1302870 - 1303277 | 14540.6 |
| isochorismate synthase | HMPREF1065_01150 | Not Available | Positive | 1303274 - 1304443 | 44327.8 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | HMPREF1065_01151 | Not Available | Positive | 1304443 - 1306116 | 62947.0 |
| naphthoate synthase | HMPREF1065_01152 | Not Available | Positive | 1306116 - 1306937 | 30338.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

