Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01095 | Not Available | Positive | 1237818 - 1238249 | 15168.5 |
| sodium ion-translocating decarboxylase, beta subunit | HMPREF1065_01096 | Not Available | Positive | 1238251 - 1239411 | 40880.4 |
| hypothetical protein | HMPREF1065_01097 | Not Available | Positive | 1239586 - 1239834 | 9265.28 |
| hypothetical protein | HMPREF1065_01098 | Not Available | Negative | 1239926 - 1240684 | 27313.0 |
| hypothetical protein | HMPREF1065_01099 | Not Available | Negative | 1240689 - 1241507 | 30804.0 |
| heavy metal translocating p-type atpase | HMPREF1065_01100 | Not Available | Positive | 1241605 - 1243314 | 62111.8 |
| hypothetical protein | HMPREF1065_01101 | Not Available | Positive | 1243337 - 1243762 | 16165.6 |
| hypothetical protein | HMPREF1065_01102 | Not Available | Negative | 1243936 - 1245087 | 43021.6 |
| hypothetical protein | HMPREF1065_01103 | Not Available | Negative | 1245205 - 1245768 | 22255.1 |
| hypothetical protein | HMPREF1065_01104 | Not Available | Negative | 1245749 - 1245931 | 7414.17 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

