Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01085 | Not Available | Negative | 1229676 - 1230683 | 37594.3 |
| maf-like protein | HMPREF1065_01086 | Not Available | Negative | 1230749 - 1231330 | 21837.4 |
| yrbi family 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | HMPREF1065_01087 | Not Available | Negative | 1231348 - 1231866 | 19167.2 |
| hypothetical protein | HMPREF1065_01088 | Not Available | Negative | 1231872 - 1232678 | 29755.2 |
| hypothetical protein | HMPREF1065_01089 | Not Available | Negative | 1232678 - 1233004 | 11898.3 |
| hypothetical protein | HMPREF1065_01090 | Not Available | Negative | 1233007 - 1233543 | 20005.4 |
| hypothetical protein | HMPREF1065_01091 | Not Available | Positive | 1233589 - 1234611 | 40101.1 |
| methylmalonyl-coa epimerase | HMPREF1065_01092 | Not Available | Positive | 1234768 - 1235181 | 14910.1 |
| hypothetical protein | HMPREF1065_01093 | Not Available | Positive | 1235284 - 1236837 | 56487.9 |
| hypothetical protein | HMPREF1065_01094 | Not Available | Positive | 1236865 - 1237794 | 34142.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

