Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01055 | Not Available | Positive | 1196805 - 1198235 | 55626.3 |
| hypothetical protein | HMPREF1065_01056 | Not Available | Positive | 1198232 - 1199077 | 32216.9 |
| methionine synthase | HMPREF1065_01057 | Not Available | Negative | 1199206 - 1201959 | 100918.0 |
| ssra-binding protein | HMPREF1065_01058 | Not Available | Negative | 1202070 - 1202522 | 17531.4 |
| hypothetical protein | HMPREF1065_01059 | Not Available | Negative | 1202522 - 1203091 | 21209.3 |
| hypothetical protein | HMPREF1065_01060 | Not Available | Positive | 1203569 - 1203715 | 5995.19 |
| hypothetical protein | HMPREF1065_01061 | Not Available | Negative | 1203830 - 1204585 | 27571.7 |
| hypothetical protein | HMPREF1065_01062 | Not Available | Positive | 1204933 - 1205547 | 23070.6 |
| sodium/glutamate symporter | HMPREF1065_01063 | Not Available | Positive | 1205763 - 1207142 | 49777.2 |
| hypothetical protein | HMPREF1065_01064 | Not Available | Negative | 1207307 - 1207825 | 19900.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

