Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_01045 | Not Available | Positive | 1187805 - 1188755 | 36697.5 |
| hypothetical protein | HMPREF1065_01046 | Not Available | Positive | 1188752 - 1189672 | 33458.2 |
| hypothetical protein | HMPREF1065_01047 | Not Available | Positive | 1189709 - 1190290 | 21752.9 |
| chorismate synthase | HMPREF1065_01048 | Not Available | Positive | 1190497 - 1191573 | 39086.7 |
| hypothetical protein | HMPREF1065_01049 | Not Available | Positive | 1191587 - 1192939 | 49775.0 |
| hypothetical protein | HMPREF1065_01050 | Not Available | Positive | 1192952 - 1193581 | 23146.0 |
| hypothetical protein | HMPREF1065_01051 | Not Available | Negative | 1193669 - 1193917 | 9357.21 |
| hypothetical protein | HMPREF1065_01052 | Not Available | Negative | 1194120 - 1194443 | 11743.4 |
| xanthine phosphoribosyltransferase | HMPREF1065_01053 | Not Available | Positive | 1194800 - 1195366 | 20888.7 |
| xanthine permease | HMPREF1065_01054 | Not Available | Positive | 1195371 - 1196702 | 46612.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

