Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1065_00995 | Not Available | Positive | 1128711 - 1129349 | 24617.4 |
| hypothetical protein | HMPREF1065_00996 | Not Available | Positive | 1129466 - 1130509 | 40414.5 |
| hypothetical protein | HMPREF1065_00997 | Not Available | Positive | 1130502 - 1131287 | 30234.5 |
| hypothetical protein | HMPREF1065_00998 | Not Available | Negative | 1131389 - 1134520 | 117886.0 |
| hypothetical protein | HMPREF1065_00999 | Not Available | Positive | 1134769 - 1135608 | 30795.0 |
| n-acetylmuramic acid 6-phosphate etherase | HMPREF1065_01000 | Not Available | Positive | 1135605 - 1136441 | 30366.9 |
| hypothetical protein | HMPREF1065_01001 | Not Available | Positive | 1136445 - 1137146 | 26389.7 |
| ribosomal protein s1 | HMPREF1065_01002 | Not Available | Positive | 1137663 - 1139459 | 67077.1 |
| hypothetical protein | HMPREF1065_01003 | Not Available | Positive | 1139708 - 1140154 | 17074.5 |
| ribonuclease z | HMPREF1065_01004 | Not Available | Positive | 1140327 - 1141154 | 31420.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

