Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxythreonine-4-phosphate dehydrogenase | HMPREF1065_00985 | Not Available | Negative | 1117288 - 1118388 | 40675.5 |
| hypothetical protein | HMPREF1065_00986 | Not Available | Negative | 1118416 - 1119480 | 40634.1 |
| ribosomal rna large subunit methyltransferase n | HMPREF1065_00987 | Not Available | Negative | 1119505 - 1120554 | 39567.0 |
| hypothetical protein | HMPREF1065_00988 | Not Available | Positive | 1120641 - 1123112 | 94543.3 |
| spoiid/lytb domain-containing protein | HMPREF1065_00989 | Not Available | Positive | 1123169 - 1124485 | 49890.8 |
| hypothetical protein | HMPREF1065_00990 | Not Available | Positive | 1124551 - 1125825 | 47721.2 |
| hypothetical protein | HMPREF1065_00991 | Not Available | Positive | 1126366 - 1126503 | 5116.37 |
| hypothetical protein | HMPREF1065_00992 | Not Available | Positive | 1126713 - 1127249 | 19466.4 |
| hypothetical protein | HMPREF1065_00993 | Not Available | Positive | 1127483 - 1128040 | 20137.2 |
| hypothetical protein | HMPREF1065_00994 | Not Available | Positive | 1128066 - 1128698 | 24220.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

