Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | CL03T12C01 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578661 bp
Thymine Count
1570423 bp
Guanine Count
1116965 bp
Cytosine Count
1121200 bp
Genome Length
5387249 bp
Protein-coding Genes
4417 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-terminal processing peptidase | HMPREF1065_00948 | Not Available | Positive | 1080835 - 1082583 | 64827.6 |
| 5-formyltetrahydrofolate cyclo-ligase | HMPREF1065_00949 | Not Available | Positive | 1082558 - 1083037 | 18258.8 |
| hypothetical protein | HMPREF1065_00950 | Not Available | Negative | 1083210 - 1083500 | 11239.9 |
| dna replication and repair protein recf | HMPREF1065_00951 | Not Available | Negative | 1083497 - 1084612 | 42992.6 |
| hypothetical protein | HMPREF1065_00952 | Not Available | Positive | 1084765 - 1085442 | 24522.3 |
| 6,7-dimethyl-8-ribityllumazine synthase | HMPREF1065_00953 | Not Available | Positive | 1085541 - 1086047 | 18015.5 |
| Trna-tyr | Not Available | Not Available | Positive | 1086159 - 1086244 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1086250 - 1086322 | Not Available |
| hypothetical protein | HMPREF1065_00954 | Not Available | Positive | 1086379 - 1087653 | 49106.6 |
| hypothetical protein | HMPREF1065_00955 | Not Available | Positive | 1087730 - 1088617 | 34066.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

