Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_00951 | Not Available | Positive | 1014728 - 1016236 | 52500.6 |
| hypothetical protein | HMPREF9695_00952 | Not Available | Positive | 1016384 - 1017562 | 42334.1 |
| taxi family trap transporter solute receptor | HMPREF9695_00953 | Not Available | Negative | 1017620 - 1018585 | 34061.3 |
| trap transporter, 4tm/12tm fusion protein | HMPREF9695_00954 | Not Available | Negative | 1018611 - 1020626 | 71308.6 |
| hypothetical protein | HMPREF9695_00955 | Not Available | Positive | 1021006 - 1021707 | 25727.0 |
| efflux transporter, rnd family, mfp subunit | HMPREF9695_00956 | Not Available | Positive | 1021782 - 1022903 | 40175.5 |
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | HMPREF9695_00957 | Not Available | Positive | 1022925 - 1026008 | 110649.0 |
| hypothetical protein | HMPREF9695_00958 | Not Available | Positive | 1026073 - 1026729 | 23521.3 |
| hypothetical protein | HMPREF9695_00959 | Not Available | Positive | 1026726 - 1029188 | 88081.1 |
| hypothetical protein | HMPREF9695_00960 | Not Available | Positive | 1029178 - 1030266 | 39488.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
