Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_00931 | Not Available | Negative | 991098 - 991295 | 7320.85 |
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | HMPREF9695_00932 | Not Available | Negative | 991321 - 994536 | 115472.0 |
| efflux transporter, rnd family, mfp subunit | HMPREF9695_00933 | Not Available | Negative | 994688 - 995863 | 41818.2 |
| hypothetical protein | HMPREF9695_00934 | Not Available | Positive | 996088 - 996684 | 21491.6 |
| hypothetical protein | HMPREF9695_00935 | Not Available | Negative | 996703 - 997518 | 28124.9 |
| hypothetical protein | HMPREF9695_00936 | Not Available | Negative | 997577 - 999076 | 54453.9 |
| porphobilinogen deaminase | HMPREF9695_00937 | Not Available | Positive | 999214 - 1000197 | 34929.0 |
| uroporphyrinogen decarboxylase | HMPREF9695_00938 | Not Available | Negative | 1000194 - 1001288 | 40112.4 |
| hypothetical protein | HMPREF9695_00939 | Not Available | Positive | 1001487 - 1002500 | 36310.5 |
| hypothetical protein | HMPREF9695_00940 | Not Available | Negative | 1002628 - 1004046 | 53248.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
