Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c2 | HMPREF9695_00881 | Not Available | Positive | 932938 - 933333 | 13833.3 |
| 5-methyltetrahydropteroyltriglutamate- homocysteine methyltransferase | HMPREF9695_00882 | Not Available | Negative | 933445 - 935832 | 87799.9 |
| ribonucleoside-diphosphate reductase, alpha subunit | HMPREF9695_00883 | Not Available | Positive | 936696 - 939614 | 107688.0 |
| hypothetical protein | HMPREF9695_00884 | Not Available | Positive | 939746 - 940888 | 43591.9 |
| hypothetical protein | HMPREF9695_00885 | Not Available | Positive | 941103 - 943151 | 71380.5 |
| hypothetical protein | HMPREF9695_00886 | Not Available | Negative | 943268 - 943747 | 18315.0 |
| hypothetical protein | HMPREF9695_00887 | Not Available | Positive | 943910 - 945520 | 59672.8 |
| hypothetical protein | HMPREF9695_00888 | Not Available | Positive | 945528 - 945758 | 8234.71 |
| hypothetical protein | HMPREF9695_00889 | Not Available | Positive | 945755 - 946708 | 34666.1 |
| homogentisate 1,2-dioxygenase | HMPREF9695_00890 | Not Available | Positive | 946862 - 948208 | 49812.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
