Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphite transport system permease ptxc | HMPREF9695_04980 | Not Available | Negative | 5194579 - 5195397 | 29177.2 |
| phosphate/phosphite/phosphonate abc transporter, periplasmic binding protein | HMPREF9695_04981 | Not Available | Negative | 5195405 - 5196265 | 31248.7 |
| phosphonate abc transporter, atp-binding protein | HMPREF9695_04982 | Not Available | Negative | 5196262 - 5197113 | 31071.4 |
| error-prone dna polymerase 2 | HMPREF9695_04983 | Not Available | Negative | 5197459 - 5199174 | 64446.1 |
| hypothetical protein | HMPREF9695_04984 | Not Available | Negative | 5199171 - 5200694 | 55407.8 |
| hypothetical protein | HMPREF9695_04985 | Not Available | Positive | 5200987 - 5201253 | 9457.24 |
| rele/stbe family addiction module toxin | HMPREF9695_04986 | Not Available | Negative | 5201623 - 5201916 | 10624.7 |
| relb/dinj family addiction module antitoxin | HMPREF9695_04987 | Not Available | Negative | 5201913 - 5202218 | 10954.8 |
| hypothetical protein | HMPREF9695_04988 | Not Available | Negative | 5202297 - 5203223 | 34169.3 |
| hypothetical protein | HMPREF9695_04989 | Not Available | Negative | 5203561 - 5204148 | 21186.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
