Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_04970 | Not Available | Negative | 5182606 - 5183031 | 16227.4 |
| hypothetical protein | HMPREF9695_04971 | Not Available | Positive | 5183171 - 5183761 | 22301.6 |
| exodeoxyribonuclease iii | HMPREF9695_04972 | Not Available | Negative | 5183769 - 5184599 | 31142.2 |
| dna ligase d | HMPREF9695_04973 | Not Available | Negative | 5184603 - 5186492 | 69002.7 |
| hypothetical protein | HMPREF9695_04974 | Not Available | Negative | 5186558 - 5186743 | 6776.05 |
| error-prone dna polymerase 2 | HMPREF9695_04975 | Not Available | Negative | 5186871 - 5188448 | 58281.4 |
| hypothetical protein | HMPREF9695_04976 | Not Available | Negative | 5188491 - 5191463 | 110403.0 |
| hypothetical protein | HMPREF9695_04977 | Not Available | Positive | 5191593 - 5192225 | 22928.9 |
| hypothetical protein | HMPREF9695_04978 | Not Available | Negative | 5192670 - 5193557 | 32541.1 |
| hypothetical protein | HMPREF9695_04979 | Not Available | Negative | 5193565 - 5194566 | 35798.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
