Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9695_04880 | Not Available | Positive | 5094860 - 5096752 | 69011.1 |
| aliphatic sulfonates family abc transporter, substrate-binding protein | HMPREF9695_04881 | Not Available | Negative | 5096765 - 5097751 | 34391.1 |
| aliphatic sulfonates family abc transporter, substrate-binding protein | HMPREF9695_04882 | Not Available | Positive | 5098190 - 5099140 | 33582.2 |
| aliphatic sulfonates family abc transporter, substrate-binding protein | HMPREF9695_04883 | Not Available | Positive | 5099184 - 5100152 | 34073.2 |
| alkanesulfonate monooxygenase | HMPREF9695_04884 | Not Available | Positive | 5100149 - 5101315 | 42364.3 |
| hypothetical protein | HMPREF9695_04885 | Not Available | Positive | 5101312 - 5102124 | 29684.2 |
| aliphatic sulfonates import atp-binding protein ssub | HMPREF9695_04886 | Not Available | Positive | 5102132 - 5102989 | 31006.3 |
| hypothetical protein | HMPREF9695_04887 | Not Available | Positive | 5102997 - 5103584 | 20994.1 |
| hypothetical protein | HMPREF9695_04888 | Not Available | Positive | 5103740 - 5104210 | 17402.8 |
| hypothetical protein | HMPREF9695_04889 | Not Available | Positive | 5104265 - 5104549 | 9925.16 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
