Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase, b subunit | HMPREF9695_04860 | Not Available | Negative | 5074650 - 5077091 | 89687.4 |
| dna replication and repair protein recf | HMPREF9695_04861 | Not Available | Negative | 5077337 - 5078482 | 41151.1 |
| dna polymerase iii, beta subunit | HMPREF9695_04862 | Not Available | Negative | 5078972 - 5080090 | 40379.4 |
| chromosomal replication initiator protein dnaa | HMPREF9695_04863 | Not Available | Negative | 5080317 - 5081858 | 56836.6 |
| 30s ribosomal protein s20 | HMPREF9695_04864 | Not Available | Negative | 5082977 - 5083243 | 9879.18 |
| hypothetical protein | HMPREF9695_04865 | Not Available | Negative | 5083363 - 5083482 | 4244.18 |
| hypothetical protein | HMPREF9695_04866 | Not Available | Positive | 5083554 - 5083871 | 11846.9 |
| peptide methionine sulfoxide reductase msra 1 | HMPREF9695_04867 | Not Available | Positive | 5084041 - 5084694 | 23287.3 |
| hypothetical protein | HMPREF9695_04868 | Not Available | Positive | 5084829 - 5085395 | 19720.9 |
| hypothetical protein | HMPREF9695_04869 | Not Available | Negative | 5085403 - 5086074 | 23740.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
