Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had hydrolase, family ia | HMPREF9695_04840 | Not Available | Negative | 5052855 - 5053553 | 24988.8 |
| ferric uptake regulation protein | HMPREF9695_04841 | Not Available | Negative | 5053550 - 5054014 | 17920.4 |
| ribosomal-protein-alanine acetyltransferase | HMPREF9695_04842 | Not Available | Negative | 5054063 - 5054569 | 18940.7 |
| universal bacterial protein yeaz | HMPREF9695_04843 | Not Available | Negative | 5054572 - 5055261 | 23883.2 |
| hypothetical protein | HMPREF9695_04844 | Not Available | Negative | 5055368 - 5055934 | 20303.2 |
| hypothetical protein | HMPREF9695_04845 | Not Available | Negative | 5056160 - 5056654 | 17482.8 |
| tryptophanyl-trna synthetase | HMPREF9695_04846 | Not Available | Negative | 5056864 - 5057901 | 37801.1 |
| integral membrane protein mvin | HMPREF9695_04847 | Not Available | Negative | 5057967 - 5059523 | 54364.1 |
| hypothetical protein | HMPREF9695_04848 | Not Available | Positive | 5059674 - 5060675 | 34836.4 |
| hypothetical protein | HMPREF9695_04849 | Not Available | Positive | 5060872 - 5061201 | 11992.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
