Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_04820 | Not Available | Negative | 5029411 - 5030007 | 21608.1 |
| catalase-peroxidase | HMPREF9695_04821 | Not Available | Negative | 5030137 - 5032347 | 80430.7 |
| hypothetical protein | HMPREF9695_04822 | Not Available | Negative | 5032672 - 5033427 | 27298.5 |
| polyribonucleotide nucleotidyltransferase | HMPREF9695_04823 | Not Available | Negative | 5033588 - 5035732 | 77461.1 |
| 30s ribosomal protein s15 | HMPREF9695_04824 | Not Available | Negative | 5036034 - 5036303 | 10195.4 |
| trna pseudouridine synthase b | HMPREF9695_04825 | Not Available | Negative | 5036306 - 5037415 | 39803.4 |
| ribosome-binding factor a | HMPREF9695_04826 | Not Available | Negative | 5037415 - 5037840 | 15729.0 |
| translation initiation factor if-2 | HMPREF9695_04827 | Not Available | Negative | 5038038 - 5040650 | 93728.0 |
| hypothetical protein | HMPREF9695_04828 | Not Available | Negative | 5040704 - 5041387 | 24057.9 |
| transcription termination factor nusa | HMPREF9695_04829 | Not Available | Negative | 5041448 - 5043058 | 58972.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
