Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa, 36k type | HMPREF9695_04790 | Not Available | Positive | 4994495 - 4995472 | 34433.7 |
| integration host factor subunit beta | HMPREF9695_04791 | Not Available | Positive | 4995645 - 4995953 | 11381.6 |
| hypothetical protein | HMPREF9695_04792 | Not Available | Positive | 4996107 - 4996514 | 14610.9 |
| n-(5'-phosphoribosyl)anthranilate isomerase | HMPREF9695_04793 | Not Available | Positive | 4996583 - 4997263 | 23758.8 |
| tryptophan synthase beta chain | HMPREF9695_04794 | Not Available | Positive | 4997260 - 4998477 | 44090.2 |
| tryptophan synthase alpha chain | HMPREF9695_04795 | Not Available | Positive | 4998474 - 4999310 | 28836.9 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit beta | HMPREF9695_04796 | Not Available | Positive | 4999402 - 5000319 | 33565.9 |
| folc protein | HMPREF9695_04797 | Not Available | Positive | 5000316 - 5001662 | 48414.4 |
| hypothetical protein | HMPREF9695_04798 | Not Available | Positive | 5001677 - 5002417 | 27113.4 |
| thioredoxin | HMPREF9695_04799 | Not Available | Negative | 5002481 - 5002801 | 11286.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
