Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l19 | HMPREF9695_04780 | Not Available | Negative | 4985459 - 4985842 | 14180.2 |
| trna (guanine-n(1)-)-methyltransferase | HMPREF9695_04781 | Not Available | Negative | 4985945 - 4986685 | 26313.7 |
| ribosome maturation factor rimm | HMPREF9695_04782 | Not Available | Negative | 4986702 - 4987235 | 18986.8 |
| 30s ribosomal protein s16 | HMPREF9695_04783 | Not Available | Negative | 4987244 - 4987576 | 12485.3 |
| signal recognition particle protein | HMPREF9695_04784 | Not Available | Negative | 4987621 - 4989150 | 53893.4 |
| hypothetical protein | HMPREF9695_04785 | Not Available | Positive | 4989420 - 4990478 | 38745.1 |
| hypothetical protein | HMPREF9695_04786 | Not Available | Negative | 4990485 - 4991186 | 24097.7 |
| hypothetical protein | HMPREF9695_04787 | Not Available | Negative | 4991222 - 4992043 | 28032.0 |
| diaminopimelate epimerase | HMPREF9695_04788 | Not Available | Positive | 4992208 - 4993080 | 31669.7 |
| miab-like trna modifying enzyme | HMPREF9695_04789 | Not Available | Positive | 4993083 - 4994333 | 45426.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
