Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter, rnd family, mfp subunit | HMPREF9695_04760 | Not Available | Positive | 4965140 - 4966342 | 42647.9 |
| hydrophobe/amphiphile efflux-1 (hae1) family rnd transporter | HMPREF9695_04761 | Not Available | Positive | 4966523 - 4969711 | 114004.0 |
| hypothetical protein | HMPREF9695_04762 | Not Available | Negative | 4969829 - 4971010 | 40896.1 |
| 3-isopropylmalate dehydrogenase | HMPREF9695_04763 | Not Available | Positive | 4971161 - 4972273 | 40024.4 |
| hypothetical protein | HMPREF9695_04764 | Not Available | Negative | 4972276 - 4974465 | 77954.5 |
| hypothetical protein | HMPREF9695_04765 | Not Available | Negative | 4974490 - 4974867 | 13947.5 |
| hypothetical protein | HMPREF9695_04766 | Not Available | Negative | 4975004 - 4975738 | 27323.5 |
| hypothetical protein | HMPREF9695_04767 | Not Available | Negative | 4975778 - 4976593 | 28648.3 |
| aspartate-semialdehyde dehydrogenase | HMPREF9695_04768 | Not Available | Positive | 4976802 - 4977836 | 37615.2 |
| tigr00645 family protein | HMPREF9695_04769 | Not Available | Positive | 4977877 - 4978461 | 21567.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
