Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l20 | HMPREF9695_04653 | Not Available | Negative | 4864645 - 4865004 | 13066.2 |
| 50s ribosomal protein l35 | HMPREF9695_04654 | Not Available | Negative | 4865071 - 4865271 | 7453.4 |
| hypothetical protein | HMPREF9695_04655 | Not Available | Positive | 4865549 - 4865914 | 12053.2 |
| hypothetical protein | HMPREF9695_04656 | Not Available | Positive | 4866034 - 4866456 | 14081.5 |
| hypothetical protein | HMPREF9695_04657 | Not Available | Negative | 4866534 - 4866947 | 14950.7 |
| hypothetical protein | HMPREF9695_04658 | Not Available | Negative | 4867044 - 4867589 | 20143.2 |
| hypothetical protein | HMPREF9695_04659 | Not Available | Positive | 4867701 - 4868051 | 12312.4 |
| hypothetical protein | HMPREF9695_04660 | Not Available | Negative | 4868067 - 4868741 | 24816.2 |
| thioredoxin | HMPREF9695_04661 | Not Available | Negative | 4868785 - 4869669 | 31417.7 |
| Trna-gly | Not Available | Not Available | Positive | 4870057 - 4870131 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
