Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dephospho-coa kinase | HMPREF9695_04603 | Not Available | Positive | 4815525 - 4816139 | 22298.1 |
| dna polymerase iii, epsilon subunit | HMPREF9695_04604 | Not Available | Positive | 4816170 - 4816865 | 25601.5 |
| protein-export protein secb | HMPREF9695_04605 | Not Available | Negative | 4816911 - 4817396 | 17837.3 |
| hypothetical protein | HMPREF9695_04606 | Not Available | Positive | 4817796 - 4818494 | 25461.1 |
| hypothetical protein | HMPREF9695_04607 | Not Available | Positive | 4818472 - 4820196 | 62717.6 |
| hypothetical protein | HMPREF9695_04608 | Not Available | Positive | 4820193 - 4820777 | 21655.5 |
| atp-dependent protease atpase subunit hslu | HMPREF9695_04609 | Not Available | Negative | 4820783 - 4822084 | 47794.4 |
| upf0314 protein | HMPREF9695_04610 | Not Available | Negative | 4822132 - 4822743 | 22315.6 |
| atp-dependent protease subunit hslv | HMPREF9695_04611 | Not Available | Negative | 4822740 - 4823291 | 19561.5 |
| imidazoleglycerol-phosphate dehydratase | HMPREF9695_04612 | Not Available | Positive | 4823474 - 4824067 | 21511.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
