Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_04554 | Not Available | Positive | 4766057 - 4766386 | 11916.2 |
| nitrogen regulatory protein | HMPREF9695_04555 | Not Available | Negative | 4766437 - 4766898 | 16370.2 |
| ribosomal subunit interface protein | HMPREF9695_04556 | Not Available | Negative | 4767038 - 4767661 | 22389.4 |
| rna polymerase sigma-54 factor 2 | HMPREF9695_04557 | Not Available | Negative | 4767726 - 4769366 | 59508.7 |
| hypothetical protein | HMPREF9695_04558 | Not Available | Negative | 4769497 - 4770573 | 39436.4 |
| lipopolysaccharide transport periplasmic protein lpta | HMPREF9695_04559 | Not Available | Negative | 4770683 - 4771423 | 25525.5 |
| hypothetical protein | HMPREF9695_04560 | Not Available | Negative | 4771420 - 4772106 | 24755.0 |
| hypothetical protein | HMPREF9695_04561 | Not Available | Negative | 4772274 - 4772888 | 22742.2 |
| hypothetical protein | HMPREF9695_04562 | Not Available | Positive | 4773236 - 4773484 | 8635.16 |
| zinc-binding alcohol dehydrogenase | HMPREF9695_04563 | Not Available | Negative | 4773574 - 4774587 | 35962.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
