Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme exporter protein c | HMPREF9695_04535 | Not Available | Positive | 4748635 - 4749366 | 26802.5 |
| heme exporter protein ccmd | HMPREF9695_04536 | Not Available | Positive | 4749372 - 4749563 | 6866.47 |
| thiol:disulfide interchange protein cycy | HMPREF9695_04537 | Not Available | Positive | 4749560 - 4750150 | 21360.8 |
| hypothetical protein | HMPREF9695_04538 | Not Available | Positive | 4750276 - 4750656 | 13245.2 |
| intracellular septation protein a | HMPREF9695_04539 | Not Available | Negative | 4750810 - 4751421 | 22245.9 |
| signal recognition particle-docking protein ftsy | HMPREF9695_04540 | Not Available | Negative | 4751424 - 4752371 | 33313.2 |
| rlua family pseudouridine synthase | HMPREF9695_04541 | Not Available | Positive | 4752424 - 4753155 | 26603.0 |
| 30s ribosomal protein s1 | HMPREF9695_04542 | Not Available | Negative | 4753228 - 4754928 | 62793.1 |
| cytidylate kinase | HMPREF9695_04543 | Not Available | Negative | 4755195 - 4755833 | 22640.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | HMPREF9695_04544 | Not Available | Negative | 4755830 - 4757167 | 46514.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
