Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoyl dehydrogenase | HMPREF9695_04515 | Not Available | Negative | 4724209 - 4725612 | 49166.8 |
| hypothetical protein | HMPREF9695_04516 | Not Available | Negative | 4725642 - 4726385 | 25343.3 |
| homoserine/threonine efflux protein | HMPREF9695_04517 | Not Available | Negative | 4726410 - 4727051 | 22518.8 |
| hypothetical protein | HMPREF9695_04518 | Not Available | Negative | 4727056 - 4728297 | 43645.6 |
| 2-oxoglutarate dehydrogenase e1 component | HMPREF9695_04519 | Not Available | Negative | 4728399 - 4731350 | 110341.0 |
| succinyl-coa ligase | HMPREF9695_04520 | Not Available | Negative | 4731486 - 4732370 | 30069.4 |
| succinyl-coa ligase | HMPREF9695_04521 | Not Available | Negative | 4732375 - 4733571 | 42401.3 |
| malate dehydrogenase | HMPREF9695_04522 | Not Available | Negative | 4733680 - 4734648 | 34043.4 |
| hypothetical protein | HMPREF9695_04523 | Not Available | Negative | 4734841 - 4736025 | 43682.2 |
| 2'-5' rna ligase | HMPREF9695_04524 | Not Available | Negative | 4736086 - 4736622 | 19584.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
