Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_04466 | Not Available | Positive | 4678814 - 4679128 | 11374.6 |
| hypothetical protein | HMPREF9695_04467 | Not Available | Positive | 4679194 - 4679577 | 13439.1 |
| malate dehydrogenase | HMPREF9695_04468 | Not Available | Negative | 4679674 - 4680657 | 35336.6 |
| hypothetical protein | HMPREF9695_04469 | Not Available | Negative | 4680690 - 4681157 | 16466.4 |
| 40-residue yvtn family beta-propeller | HMPREF9695_04470 | Not Available | Negative | 4681293 - 4682729 | 50300.9 |
| hypothetical protein | HMPREF9695_04471 | Not Available | Negative | 4682774 - 4683157 | 13678.6 |
| hypothetical protein | HMPREF9695_04472 | Not Available | Positive | 4683332 - 4683757 | 14560.4 |
| sigma-70 family rna polymerase sigma factor | HMPREF9695_04473 | Not Available | Positive | 4683833 - 4684339 | 19450.6 |
| hypothetical protein | HMPREF9695_04474 | Not Available | Positive | 4684336 - 4685136 | 29480.0 |
| hypothetical protein | HMPREF9695_04475 | Not Available | Positive | 4685238 - 4686320 | 38122.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
