Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9695_04357 | Not Available | Negative | 4583044 - 4584075 | 36950.3 |
| Trna-ser | Not Available | Not Available | Positive | 4584561 - 4584650 | Not Available |
| alpha,alpha-trehalose-phosphate synthase (udp-forming) | HMPREF9695_04358 | Not Available | Negative | 4584740 - 4586236 | 54615.4 |
| hypothetical protein | HMPREF9695_04359 | Not Available | Negative | 4586505 - 4588343 | 68941.2 |
| trehalose-phosphatase | HMPREF9695_04360 | Not Available | Negative | 4588340 - 4589152 | 29073.0 |
| hypothetical protein | HMPREF9695_04361 | Not Available | Negative | 4589152 - 4590654 | 53184.2 |
| hypothetical protein | HMPREF9695_04362 | Not Available | Positive | 4592036 - 4592521 | 17006.4 |
| carbon-monoxide dehydrogenase, large subunit | HMPREF9695_04363 | Not Available | Positive | 4592607 - 4594961 | 83872.1 |
| hypothetical protein | HMPREF9695_04364 | Not Available | Positive | 4594979 - 4595779 | 27835.4 |
| hypothetical protein | HMPREF9695_04365 | Not Available | Negative | 4595844 - 4596260 | 14745.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
