Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_04307 | Not Available | Positive | 4530102 - 4531682 | 54791.4 |
| allophanate hydrolase | HMPREF9695_04308 | Not Available | Positive | 4531714 - 4533516 | 62267.0 |
| hypothetical protein | HMPREF9695_04309 | Not Available | Positive | 4533530 - 4533661 | 4799.76 |
| pkhd-type hydroxylase | HMPREF9695_04310 | Not Available | Negative | 4533628 - 4534308 | 25286.4 |
| tonb-dependent siderophore receptor | HMPREF9695_04311 | Not Available | Negative | 4534449 - 4536836 | 86453.5 |
| hypothetical protein | HMPREF9695_04312 | Not Available | Positive | 4537084 - 4538256 | 42712.6 |
| hypothetical protein | HMPREF9695_04313 | Not Available | Positive | 4538436 - 4540547 | 74945.7 |
| tonb-system energizer exbb | HMPREF9695_04314 | Not Available | Positive | 4540805 - 4541722 | 31915.3 |
| tonb system transporter exbd | HMPREF9695_04315 | Not Available | Positive | 4541727 - 4542158 | 15036.4 |
| tonb family domain-containing protein | HMPREF9695_04316 | Not Available | Positive | 4542177 - 4542929 | 26692.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
