Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna-[protein]-cysteine s-methyltransferase | HMPREF9695_04267 | Not Available | Positive | 4487000 - 4487590 | 20736.0 |
| hypothetical protein | HMPREF9695_04268 | Not Available | Positive | 4487600 - 4488448 | 30861.6 |
| hypothetical protein | HMPREF9695_04269 | Not Available | Positive | 4488471 - 4488830 | 12469.5 |
| hypothetical protein | HMPREF9695_04270 | Not Available | Positive | 4488855 - 4489250 | 14548.2 |
| hypothetical protein | HMPREF9695_04271 | Not Available | Positive | 4489510 - 4490718 | 44341.9 |
| hypothetical protein | HMPREF9695_04272 | Not Available | Negative | 4490725 - 4492158 | 49721.1 |
| hypothetical protein | HMPREF9695_04273 | Not Available | Negative | 4492288 - 4494078 | 65129.1 |
| deoxycytidine triphosphate deaminase | HMPREF9695_04274 | Not Available | Negative | 4494226 - 4495374 | 41859.1 |
| o-succinylhomoserine sulfhydrylase | HMPREF9695_04275 | Not Available | Positive | 4495582 - 4496814 | 44251.9 |
| phenazine biosynthesis protein phzf family protein | HMPREF9695_04276 | Not Available | Positive | 4496838 - 4497677 | 30015.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
