Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit 1 | HMPREF9695_04198 | Not Available | Negative | 4413525 - 4415141 | 59235.8 |
| cytochrome c oxidase, subunit ii | HMPREF9695_04199 | Not Available | Negative | 4415226 - 4416074 | 30721.3 |
| hypothetical protein | HMPREF9695_04200 | Not Available | Positive | 4416537 - 4417076 | 18855.1 |
| hypothetical protein | HMPREF9695_04201 | Not Available | Positive | 4417175 - 4418614 | 50812.2 |
| signal peptidase i | HMPREF9695_04202 | Not Available | Positive | 4418653 - 4419432 | 28074.5 |
| hypothetical protein | HMPREF9695_04203 | Not Available | Negative | 4419623 - 4419979 | 12736.5 |
| hypothetical protein | HMPREF9695_04204 | Not Available | Negative | 4420052 - 4420624 | 20890.0 |
| glutamate-cysteine ligase | HMPREF9695_04205 | Not Available | Negative | 4420756 - 4422126 | 51491.6 |
| hypothetical protein | HMPREF9695_04206 | Not Available | Negative | 4422116 - 4422229 | 4107.26 |
| hypothetical protein | HMPREF9695_04207 | Not Available | Negative | 4422226 - 4422741 | 19028.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
