Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter, permease/atp-binding protein | HMPREF9695_04110 | Not Available | Negative | 4318254 - 4320134 | 66568.9 |
| 50s ribosomal protein l31 | HMPREF9695_04111 | Not Available | Positive | 4320194 - 4320523 | 12307.8 |
| hypothetical protein | HMPREF9695_04112 | Not Available | Negative | 4320601 - 4321110 | 18754.7 |
| hypothetical protein | HMPREF9695_04113 | Not Available | Negative | 4321466 - 4321657 | 7021.18 |
| hypothetical protein | HMPREF9695_04114 | Not Available | Positive | 4321731 - 4322729 | 34942.8 |
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9695_04115 | Not Available | Positive | 4322840 - 4325857 | 110408.0 |
| upf0301 protein | HMPREF9695_04116 | Not Available | Negative | 4325872 - 4326522 | 22963.7 |
| hypothetical protein | HMPREF9695_04117 | Not Available | Positive | 4326683 - 4327549 | 30425.7 |
| hypothetical protein | HMPREF9695_04118 | Not Available | Positive | 4327666 - 4328151 | 17383.9 |
| ribonuclease h | HMPREF9695_04119 | Not Available | Negative | 4328323 - 4328772 | 16544.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
