Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol kinase | HMPREF9695_04060 | Not Available | Negative | 4262478 - 4263986 | 54505.6 |
| hypothetical protein | HMPREF9695_04061 | Not Available | Negative | 4264226 - 4264999 | 27030.6 |
| pimeloyl-coa dehydrogenase, small subunit | HMPREF9695_04062 | Not Available | Negative | 4265182 - 4266324 | 40916.9 |
| pimeloyl-coa dehydrogenase, large subunit | HMPREF9695_04063 | Not Available | Negative | 4266470 - 4267657 | 44554.0 |
| acetyl-coa c-acetyltransferase | HMPREF9695_04064 | Not Available | Negative | 4267725 - 4268909 | 41358.8 |
| dicarboxylate-coa ligase pima | HMPREF9695_04065 | Not Available | Negative | 4268906 - 4270588 | 60994.4 |
| hypothetical protein | HMPREF9695_04066 | Not Available | Negative | 4270767 - 4272857 | 73916.8 |
| hypothetical protein | HMPREF9695_04067 | Not Available | Positive | 4273053 - 4273865 | 29269.6 |
| hypothetical protein | HMPREF9695_04068 | Not Available | Positive | 4274174 - 4274971 | 29084.5 |
| hypothetical protein | HMPREF9695_04069 | Not Available | Positive | 4274968 - 4275681 | 25927.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
