Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_04050 | Not Available | Negative | 4249628 - 4251511 | 71417.6 |
| hypothetical protein | HMPREF9695_04051 | Not Available | Negative | 4251714 - 4252262 | 18974.9 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | HMPREF9695_04052 | Not Available | Positive | 4252474 - 4253220 | 26630.3 |
| hypothetical protein | HMPREF9695_04053 | Not Available | Positive | 4253217 - 4254080 | 30977.3 |
| hypothetical protein | HMPREF9695_04054 | Not Available | Positive | 4254158 - 4254784 | 23783.4 |
| luciferase family oxidoreductase, group 1 | HMPREF9695_04055 | Not Available | Negative | 4254810 - 4255829 | 37375.6 |
| 5,10-methylenetetrahydrofolate reductase | HMPREF9695_04056 | Not Available | Positive | 4256264 - 4257175 | 32987.1 |
| methionine synthase | HMPREF9695_04057 | Not Available | Positive | 4257180 - 4261034 | 140949.0 |
| hypothetical protein | HMPREF9695_04058 | Not Available | Positive | 4261210 - 4261758 | 19353.8 |
| hypothetical protein | HMPREF9695_04059 | Not Available | Negative | 4261828 - 4262454 | 23411.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
