Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold shock protein cspa | HMPREF9695_04030 | Not Available | Positive | 4228959 - 4229171 | 7505.81 |
| hypothetical protein | HMPREF9695_04031 | Not Available | Negative | 4229285 - 4229887 | 21727.4 |
| hypothetical protein | HMPREF9695_04032 | Not Available | Negative | 4229901 - 4230458 | 20341.4 |
| hypothetical protein | HMPREF9695_04033 | Not Available | Negative | 4230596 - 4231090 | 17410.0 |
| hypothetical protein | HMPREF9695_04034 | Not Available | Positive | 4231437 - 4231601 | 5537.83 |
| hypothetical protein | HMPREF9695_04035 | Not Available | Positive | 4232001 - 4232525 | 18912.7 |
| flp pilus assembly protein cpab | HMPREF9695_04036 | Not Available | Positive | 4232728 - 4233513 | 27489.9 |
| hypothetical protein | HMPREF9695_04037 | Not Available | Positive | 4233531 - 4235024 | 52413.0 |
| pilus (caulobacter type) biogenesis lipoprotein cpad | HMPREF9695_04038 | Not Available | Positive | 4235046 - 4235783 | 26548.4 |
| hypothetical protein | HMPREF9695_04039 | Not Available | Positive | 4235780 - 4237042 | 44933.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
