Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease subunit beta | HMPREF9695_04020 | Not Available | Negative | 4218992 - 4219297 | 11157.6 |
| urease subunit gamma | HMPREF9695_04021 | Not Available | Negative | 4219307 - 4219609 | 11077.6 |
| urease accessory protein ured | HMPREF9695_04022 | Not Available | Negative | 4219637 - 4220440 | 28775.6 |
| urea abc transporter, atp-binding protein urte | HMPREF9695_04023 | Not Available | Negative | 4220508 - 4221203 | 25202.9 |
| urea abc transporter, atp-binding protein urtd | HMPREF9695_04024 | Not Available | Negative | 4221385 - 4222146 | 28249.9 |
| urea abc transporter, permease urtc | HMPREF9695_04025 | Not Available | Negative | 4222152 - 4223327 | 42318.8 |
| urea abc transporter, permease urtb | HMPREF9695_04026 | Not Available | Negative | 4223327 - 4224883 | 54654.2 |
| urea abc transporter, urea binding protein | HMPREF9695_04027 | Not Available | Negative | 4225046 - 4226365 | 47781.2 |
| hypothetical protein | HMPREF9695_04028 | Not Available | Positive | 4226892 - 4228340 | 52342.1 |
| translation initiation factor if-1 | HMPREF9695_04029 | Not Available | Positive | 4228395 - 4228682 | 10761.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
