Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_03870 | Not Available | Negative | 4066296 - 4066697 | 13814.4 |
| p-type conjugative transfer protein trbj | HMPREF9695_03871 | Not Available | Negative | 4066708 - 4067469 | 27201.2 |
| virb4 family type iv secretion/conjugal transfer atpase | HMPREF9695_03872 | Not Available | Negative | 4067466 - 4069904 | 89269.4 |
| hypothetical protein | HMPREF9695_03873 | Not Available | Negative | 4069918 - 4070199 | 9748.15 |
| hypothetical protein | HMPREF9695_03874 | Not Available | Negative | 4070199 - 4070531 | 11686.6 |
| p-type conjugative transfer atpase trbb | HMPREF9695_03875 | Not Available | Negative | 4070528 - 4071496 | 33764.6 |
| hypothetical protein | HMPREF9695_03876 | Not Available | Positive | 4071918 - 4072124 | 7316.77 |
| hypothetical protein | HMPREF9695_03877 | Not Available | Negative | 4072219 - 4072416 | 7775.84 |
| hypothetical protein | HMPREF9695_03878 | Not Available | Negative | 4072487 - 4072939 | 16853.5 |
| metal ion (mn2+/fe2+) transporter (nramp) family metal ion transporter | HMPREF9695_03879 | Not Available | Negative | 4073111 - 4074877 | 62595.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
