Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_01500 | Not Available | Negative | 1627220 - 1628194 | 34840.1 |
| hypothetical protein | HMPREF9695_01501 | Not Available | Negative | 1628323 - 1629234 | 32438.3 |
| dihydroxy-acid dehydratase | HMPREF9695_01502 | Not Available | Positive | 1629332 - 1631182 | 65207.9 |
| hypothetical protein | HMPREF9695_01503 | Not Available | Negative | 1631254 - 1631739 | 18059.6 |
| hypothetical protein | HMPREF9695_01504 | Not Available | Negative | 1631736 - 1632074 | 12674.3 |
| 2'-5' rna ligase | HMPREF9695_01505 | Not Available | Positive | 1632211 - 1632807 | 22247.2 |
| spx/mgsr family transcriptional regulator | HMPREF9695_01506 | Not Available | Positive | 1632838 - 1633185 | 12916.8 |
| c4-dicarboxylate transporter 4 | HMPREF9695_01507 | Not Available | Positive | 1633356 - 1634681 | 46287.8 |
| hypothetical protein | HMPREF9695_01508 | Not Available | Negative | 1634707 - 1635312 | 22919.6 |
| hypothetical protein | HMPREF9695_01509 | Not Available | Positive | 1635655 - 1636410 | 27691.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
