Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate abc transporter, permease | HMPREF9695_01460 | Not Available | Negative | 1578578 - 1579417 | 30132.9 |
| hypothetical protein | HMPREF9695_01461 | Not Available | Negative | 1579420 - 1580802 | 50620.9 |
| pas domain s-box protein | HMPREF9695_01462 | Not Available | Positive | 1580969 - 1582897 | 71769.7 |
| hypothetical protein | HMPREF9695_01463 | Not Available | Positive | 1582981 - 1586310 | 124093.0 |
| hypothetical protein | HMPREF9695_01464 | Not Available | Positive | 1586362 - 1588869 | 91257.9 |
| hypothetical protein | HMPREF9695_01465 | Not Available | Positive | 1588866 - 1589744 | 31970.3 |
| hypothetical protein | HMPREF9695_01466 | Not Available | Negative | 1589767 - 1590339 | 20373.2 |
| hypothetical protein | HMPREF9695_01467 | Not Available | Negative | 1590491 - 1590727 | 8397.55 |
| hypothetical protein | HMPREF9695_01468 | Not Available | Negative | 1590835 - 1591698 | 30958.1 |
| hypothetical protein | HMPREF9695_01469 | Not Available | Negative | 1591821 - 1592798 | 34480.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
