Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate metabolism protein phnm | HMPREF9695_01440 | Not Available | Positive | 1560750 - 1561907 | 42033.1 |
| phosphonate metabolism protein/1,5-bisphosphokinase (prpp-forming) phnn | HMPREF9695_01441 | Not Available | Positive | 1561904 - 1562482 | 20572.7 |
| hypothetical protein | HMPREF9695_01442 | Not Available | Negative | 1562668 - 1563003 | 12261.9 |
| hypothetical protein | HMPREF9695_01443 | Not Available | Negative | 1563165 - 1563398 | 8359.8 |
| coenzyme pqq synthesis protein b | HMPREF9695_01444 | Not Available | Positive | 1563600 - 1564523 | 33190.7 |
| pyrroloquinoline-quinone synthase | HMPREF9695_01445 | Not Available | Positive | 1564484 - 1565284 | 30011.6 |
| coenzyme pqq synthesis protein d | HMPREF9695_01446 | Not Available | Positive | 1565284 - 1565598 | 11597.2 |
| coenzyme pqq synthesis protein e | HMPREF9695_01447 | Not Available | Positive | 1565595 - 1566797 | 43851.2 |
| prolyl aminopeptidase | HMPREF9695_01448 | Not Available | Positive | 1566787 - 1567767 | 36033.9 |
| hypothetical protein | HMPREF9695_01449 | Not Available | Positive | 1567894 - 1569225 | 47359.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
