Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate abc transporter, periplasmic phosphonate binding protein | HMPREF9695_01430 | Not Available | Positive | 1552587 - 1553525 | 33880.2 |
| phosphonate abc transporter, permease phne | HMPREF9695_01431 | Not Available | Positive | 1553592 - 1554476 | 32188.9 |
| phosphonate abc transporter, permease phne | HMPREF9695_01432 | Not Available | Positive | 1554473 - 1555324 | 30678.2 |
| phosphonate metabolism transcriptional regulator phnf | HMPREF9695_01433 | Not Available | Negative | 1555335 - 1556066 | 26632.9 |
| phosphonate c-p lyase system protein phng | HMPREF9695_01434 | Not Available | Positive | 1556197 - 1556655 | 16357.5 |
| phosphonate c-p lyase system protein phnh | HMPREF9695_01435 | Not Available | Positive | 1556655 - 1557269 | 21349.3 |
| hypothetical protein | HMPREF9695_01436 | Not Available | Positive | 1557273 - 1558379 | 40386.9 |
| protein phnj | HMPREF9695_01437 | Not Available | Positive | 1558376 - 1559251 | 32836.9 |
| phosphonate c-p lyase system protein phnk | HMPREF9695_01438 | Not Available | Positive | 1559251 - 1560033 | 28696.8 |
| phosphonate c-p lyase system protein phnl | HMPREF9695_01439 | Not Available | Positive | 1560041 - 1560739 | 25294.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
