Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_01390 | Not Available | Positive | 1503688 - 1504026 | 12277.8 |
| fkbm family methyltransferase | HMPREF9695_01391 | Not Available | Positive | 1504543 - 1505373 | 30951.1 |
| hypothetical protein | HMPREF9695_01392 | Not Available | Positive | 1505380 - 1507140 | 64470.0 |
| hypothetical protein | HMPREF9695_01393 | Not Available | Negative | 1507256 - 1507741 | 17762.8 |
| drug:h+ antiporter-2 (14 spanner) (dha2) family drug resistance mfs transporter | HMPREF9695_01394 | Not Available | Negative | 1507795 - 1509405 | 56901.4 |
| hypothetical protein | HMPREF9695_01395 | Not Available | Negative | 1509410 - 1510618 | 42708.4 |
| hypothetical protein | HMPREF9695_01396 | Not Available | Positive | 1510718 - 1511383 | 24179.1 |
| isocitrate dehydrogenase, nadp-dependent | HMPREF9695_01397 | Not Available | Positive | 1511790 - 1514030 | 82551.4 |
| hypothetical protein | HMPREF9695_01398 | Not Available | Negative | 1514055 - 1516271 | 79208.4 |
| hypothetical protein | HMPREF9695_01399 | Not Available | Positive | 1516682 - 1517647 | 35038.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
